Variant Information for Gene:
Associated Diseases: -
Ensembl Transcript: - Refseq: - Uniprot: -RARe-SOURCE™ provides access to known variants in genes associated with rare diseases. These variants were downloaded from many public sources including gnomAD and ClinVar, and annotated using OpenCravat. Additional annotations such as AlphaMissense were also included. In addition, the RARe-SOURCE™ has manually created variants from literature for one rare disease, X-linked creatine transporter deficiency and is in the process of curating variants for Farber’s disease.
Variant Annotations – A tabular listing of variants obtained from multiple databases along
with annotations for these variants. Interactive visualizations to select and filter variants by their type
and genic location, minor allele frequency or pathogenicity predictions.
Manually Curated Variants – Clinical and functional details of manually curated variants
obtained from literature. Currently available for SLC6A8 (X-linked creatine transporter deficiency) with
Interactive visualizations to select and filter variants by gene or protein location, pathogenicity and
creatine uptake measurements.
3D Protein Structure – An integrated 2D-3D visualization of protein features from UniProt
on the protein structure.